Digital Curation of Marine Physical Samples at Ocean Networks Canada

Abstract:

Ocean Networks Canada (ONC) has collected hundreds of geological, biological and fluid samples from the water column and seafloor during its maintenance expeditions. These samples have been collected by Remotely Operated Vehicles (ROVs), divers, networked and autonomously deployed instruments, and rosettes. Subsequent measurements are used for scientific experiments, calibration of in-situ and remote sensors, monitoring of Marine Protected Areas, and environment characterization. Tracking the life cycles of these samples from collection to dissemination of results with all the pertinent documents (e.g., protocols, imagery, reports), metadata (e.g., location, identifiers, purpose, method) and data (e.g., measurements, taxonomic classification) is a challenge. The initial collection of samples is normally documented in SeaScribe (an ROV dive logging tool within ONC’s Oceans 2.0 software) for which ONC has defined semantics and syntax. Next, samples are often sent to individual scientists and institutions (e.g., Royal BC Museum) for processing and storage, making acquisition of results and life cycle metadata difficult. Finally, this information needs to be retrieved and collated such that multiple user scenarios can be addressed. ONC aims to improve and extend its digital infrastructure for physical samples to support this complex array of samples, workflows and applications. However, in order to promote effective data discovery and exchange, interoperability and community standards must be an integral part of the design. Thus, integrating recommendations and outcomes of initiatives like the EarthCube iSamples working groups are essential. Use cases, existing tools, schemas and identifiers are reviewed, while remaining gaps and challenges are identified. The current status, selected approaches and possible future directions to enhance ONC’s digital infrastructure for each sample type are presented.