B11F:
Microbial Geochemistry and Geomicrobiology: From DNA to Rock I Posters

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Session ID#: 13170

Session Description:
Over the past two decades, the fields of microbial geochemistry and geomicrobiology have extensively progressed, leading to the development of interdisciplinary methods to understand chemical, biological and geological processes.

The Critical Zone is an environment where rock, soil, water, air, and living organisms interact and shape the Earth's surface. Critical Zone microorganisms directly impact biogeochemical cycles (e.g., C, S, N, P, Fe) from the micro-scale to the global scale and over daily to geological timescales. For this session, we invite contributions concerning cycling of organic matter, nutrients or contaminants, plant-microbe interactions, microbial diversity and function and other biological-geological processes in the critical zone. We particularly encourage submission of work that involves innovative methods including isotopic, omics or modeling approaches providing insights into the evolution of biogeochemical processes in space and time.

Contributions of laboratory, field-based, theoretical and modeling approaches that can be used to better constrain biogeochemical processes are welcome.

Primary Convener:  Setareh Rad, BRGM, Environmental Biogeochemistry Unit, Orleans, France
Conveners:  Heather L Buss, University of Bristol, Bristol, United Kingdom and Sophie Opfergelt, Université Catholique de Louvain, Earth and Life Institute, Environmental Sciences, Louvain-La-Neuve, Belgium
Chairs:  Setareh Rad, BRGM, Environmental Biogeochemistry Unit, Orleans, France, Heather L Buss, University of Bristol, Bristol, United Kingdom and Sophie Opfergelt, Université Catholique de Louvain, Earth and Life Institute, Environmental Sciences, Louvain-La-Neuve, Belgium
OSPA Liaison:  Setareh Rad, BRGM, Environmental Biogeochemistry Unit, Orleans, France
Co-Organized with:
Earth and Planetary Surface Processes, and Earth and Planetary Surface Processes

Cross-Listed:
  • EP - Earth and Planetary Surface Processes

Proposed Co-Organized Session with:
  • EP - Earth and Planetary Surface Processes
Index Terms:

0419 Biomineralization [BIOGEOSCIENCES]
1039 Alteration and weathering processes [GEOCHEMISTRY]
1040 Radiogenic isotope geochemistry [GEOCHEMISTRY]
1041 Stable isotope geochemistry [GEOCHEMISTRY]

Abstracts Submitted to this Session:

Ecosystem Dynamics of the Microbial Mats in Lake Fryxell, Antarctica (190906)
Megan Krusor1, Tyler J Mackey1, Ian Hawes2, Anne D Jungblut3, Jonathan Eisen4 and Dawn Y Sumner5, (1)University of California Davis, Davis, CA, United States, (2)University of Canterbury, Gateway Antarctica, Christchurch, New Zealand, (3)The Natural History Museum, Department of Life Sciences, London, United Kingdom, (4)University of California Davis, Department of Medical Microbiology and Immunology, Davis, United States, (5)University of California, Davis, Earth and Planetary Sciences, Davis, United States
Targeted Metagenomic Survey of the Fe-Cycling Microbial Community at Chocolate Pots Hot Springs, Yellowstone National Park (179344)
Nathaniel W Fortney1,2, Shaomei He2,3, Ajinkya Kulkarni4, Michael W Friedrich4, Eric S Boyd5,6 and Eric E Roden1,6, (1)University of Wisconsin Madison, Department of Geoscience, Madison, WI, United States, (2)NASA Astrobiology Institute, Moffett Field, CA, United States, (3)University of Wisconsin Madison, Madison, WI, United States, (4)University of Bremen, Microbial Ecophysiology, Bremen, Germany, (5)Montana State University, Department of Microbiology and Cell Biology, Bozeman, MT, United States, (6)NASA Astrobiology Institute, USA, United States
Effects of iron oxide mineralogy on methanogenesis transpiring in soils and sediments (189183)
Hayley Jayne Gadol and Benjamin David Kocar, Massachusetts Institute of Technology, Civil and Environmental Engineering, Cambridge, MA, United States
Methane Biogeochemical Cycling over Seasonal and Annual Scales in an Oil Sands Tailings End Pit Lake (157562)
Corey Goad, Daniel Arriaga, Florent Risacher, Patrick Morris, Greg F Slater and Lesley A Warren, McMaster University, Hamilton, ON, Canada
Fe-rich carbonate chimney in Okinawa Trough：Implication for Fe-driven Microbial Anaerobic Oxidation of Methane (AMO) (192174)
Xiaotong Peng and Zixiao Guo, Sanya Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, China
Mineralogical, Physical and Geochemical Factors that Drive Microbial Reduction of Iron Oxides and Diagenesis under Broad Environmental Conditions (145936)
Yiran Dong1, Robert A. Sanford2, Maxim Boyanov3, Ken M Kemner3, Theodore M Flynn3, Edward J O'Loughlin4, Samantha George5, Kaitlyn Fouke6 and Bruce W Fouke5, (1)University of Illinois at Urbana Champaign, Carl R. Woese Institute for Genomic Biology, Urbana, IL, United States, (2)University of Illinois at Urbana-Champaign, Department of Geology, Urbana, IL, United States, (3)Argonne National Laboratory, Argonne, IL, United States, (4)Argonne National Laboratory, Biosciences Division, Argonne, United States, (5)University of Illinois at Urbana Champaign, Urbana, IL, United States, (6)Denison University, Department of Biology, Granville, OH, United States
Microbial diversity and hydrogeochemical characteristics of natural CO2-rich springs in Korea (154712)
Daegeun Ko, Konkuk University, Environmental Engineering, Seoul, Korea, Republic of (South), Hyun-Kwon Do, Korea University, Earth and Environmental Sciences, Seoul, Korea, Republic of (South), Seong-Taek Yun, Korea University, Earth and Environmental Sciences, Seoul, South Korea and Haegeun Chung, Konkuk University, Environmental Engineering, Seoul, South Korea
Stimulation of microbial methanogenesis from oil and CO2 in the Cushing oil field (177555)
Javier Vilcaez1, Joshua York2 and Tristan Seabeck2, (1)Oklahoma State University Main Campus, Geology, Stillwater, OK, United States, (2)Oklahoma State University Main Campus, Stillwater, OK, United States
Soil Fluxomics: Disentangling Microbial Group Specific Metabolism by Modeling of 13C-Incorporation into PLFAs (177342)
Carolin Apostel, Georg-August-Universitaet Goettingen, Goettingen, Germany, Yakov Kuzyakov, Georg-August-Universitaet Goettingen, Department of Agricultural Soil Science, Goettingen, Germany and Michaela Anna Dippold, Department of Biogeochemistry of Agroecosystems, University of Göttingen, Göttingen, Germany
Novel Fe-oxidizing Zetaproteobacteria floating in the Chesapeake: kinetics and genomic insights into microbial Fe cycling in a stratified marine water column (174960)
Beverly Chiu, University of Delaware, Newark, DE, United States, Erin K Field, East Carolina University, Biology, Greenville, NC, United States, Shingo Kato, JAMSTEC Japan Agency for Marine-Earth Science and Technology, Kanagawa, Japan, Sean McAllister, University of Delaware, Newark, United States, George W Luther III, University of Delaware, School of Marine Science and Policy, Newark, DE, United States and Clara Sze-Yue Chan, University of Delaware, Department of Earth Sciences, Newark, United States
Physiological and hydrological controls on mineral redox cycling by long-range electron transport by bacteria in anaerobic sediments (197993)
Kyle Michelson, University of Texas at Austin, Department of Civil, Architectural and Environmental Engineering, Austin, TX, United States, Charles J Werth, University of Texas at Austin, Maseeh Department of Civil, Architectural and Environmental Engineering, Austin, United States, Robert A. Sanford, University of Illinois at Urbana-Champaign, Department of Geology, Urbana, IL, United States and Albert J Valocchi, University of Illinois at Urbana-Champaign, Department of Civil and Environmental Engineering, Urbana, United States
Soluble electron shuttles control microbial community development under iron-reducing conditions in wetland sediment microcosms (166340)
Theodore M Flynn1, Margaret F Sladek1, Zena D Jensvold1, Dionysios A Antonopoulos1, Jason C Koval1, Ken M Kemner1 and Edward J O'Loughlin2, (1)Argonne National Laboratory, Biosciences Division, Argonne, IL, United States, (2)Argonne National Laboratory, Biosciences Division, Argonne, United States
Methods for in situ Mesocosm Water Table Manipulation in Amazon Peatlands (199478)
Benjamín Gabriél Sarno1, John Riley Guardia2, Max Guriz Torres2, Jaime Gerardo Lopez3, Milagros Lopez Rios2, Lenin Martimari Saquiray2, Tiffany Carly Rodriguez2, Paul Vizcarra Rivera2, Joost L M Van Haren4 and Hinsby Cadillo-Quiroz3, (1)University of California San Diego, La Jolla, CA, United States, (2)Centro de investigaciones de Recursos Naturales Amazonias, Biology, Iquitos, Peru, (3)Arizona State University, School of Life Sciences, Tempe, AZ, United States, (4)University of Arizona, Honors College, Tucson, AZ, United States
Microbial Control on Siderite Formation in Ferruginous Sediments of Lake Towuti, Indonesia. (159697)
Aurele Vuillemin1, Jens Kallmeyer1, Jan A. Schuessler1, Helga Kemnitz1, Richard Wirth1, Christoph Mayr2, Andreas Lücke3, James M Russell4, Satria Bijaksana5 and Hendrik Vogel6, (1)Helmholtz Centre Potsdam GFZ German Research Centre for Geosciences, Potsdam, Germany, (2)University of Erlangen-Nürnberg, Institute of Geography, Erlangen, Germany, (3)Forschungszentrum Jülich GmbH, Institute of Bio-and Geosciences, Agrosphere Institute (IBG-3), Wilhelm-Johnen-Straße, Jülich, Germany, (4)Brown University, Department of Earth, Environmental, and Planetary Sciences, Providence, United States, (5)Bandung Institute of Technology, Bandung, Indonesia, (6)University of Bern, Institute of Geological Sciences and Oeschger Centre for Climate Change Research, Bern, Switzerland
Linking benthic microbial community dynamics to diel redox variations in a near shore costal environment, Heʻeia Fishpond (169459)
Kiana L Frank, University of Hawaii at Manoa, Pacific Biosciences Research Center, Honolulu, United States, Karyn L Rogers, Rensselaer Polytechnic Institute, Troy, NY, United States, Charles Geoffrey Wheat, University of Alaska Fairbanks, IMS, Fairbanks, AK, United States and Rosie ʻAnolani Alegado, University of Hawaiʻi at Mānoa, Department of Oceanography, Honolulu, HI, United States
The distribution and diversity of complete nitrification bacteria in freshwater ecosystem (196694)
Yaping Zhang and Xiaohong Ruan, Nanjing University, Nanjing, China
Functional enzyme-based modeling approach for dynamic simulation of denitrification process in hyporheic zone sediments: Genetically structured microbial community model (135042)
Hyun-Seob Song1, Minjing Li2, Weijun Qian2, Xuehang Song2, Xingyuan Chen3, Timothy D Scheibe2, Jim Fredrickson2, John M Zachara2 and Chongxuan Liu2, (1)University of Nebraska Lincoln, Department of Biological Systems Engineering, Department of Food Science and Technology, Nebraska Food for Health Center, Lincoln, United States, (2)Pacific Northwest National Laboratory, Richland, WA, United States, (3)Pacific Northwest National Laboratory, Richland, United States
The Roles of Microbial Communities in n-Alkane Distribution of The Nanjenshan Lowland Subtropical Rainforest in Taiwan (169430)
Yueh-Wen Chen1, Tung-Yi Huang2, Cheng-Wei Fan2, Wei-Chun Chao3, Tien-Nan Yang4, Chun-Ping Huang1 and Bing-Mu Hsu5, (1)Graduate Institute of Applied Geophysics and Environmental Sciences National Chung Cheng University, Chiayi County, Taiwan, (2)CCU National Chung Cheng University, Earth and Environmental Sciences, Chiayi County, Taiwan, (3)National Chiayi University, Forestry and Natural Resources, Chiayi, Taiwan, (4)CPC Corporation, Taiwan, Exploration and Development Research Institute, Miaoli, Taiwan, (5)National Defense Medical Center, Graduate Institute Of Life Science, Taipei, Taiwan
A Metagenomic Survey of Serpentinites and Nearby Soils in Taiwan (132879)
Kuan-ying Li1, Yu-Wen Hsu1, Yueh-Wen Chen1, Tung-Yi Huang2, Yi-Jia Shih2, Jung-Sheng Chen3 and Bing-Mu Hsu1,2, (1)Graduate Institute of Applied Geophysics and Environmental Sciences National Chung Cheng University, Chiayi County, Taiwan, (2)CCU National Chung Cheng University, Earth and Environmental Sciences, Chiayi County, Taiwan, (3)National Defense Medical Center, Graduate Institute Of Life Science, Taipei, Taiwan
A Metagenomic Survey of Limestone Hill in Taiwan (128112)
Yu-Wen Hsu1, Kuan-ying Li1, Yueh-Wen Chen1, Tung-Yi Huang2, Wen-Jen Chen2, Yi-Jia Shih2, Jung-Sheng Chen3, Cheng-Wei Fan2 and Bing-Mu Hsu2, (1)Graduate Institute of Applied Geophysics and Environmental Sciences National Chung Cheng University, Chiayi County, Taiwan, (2)CCU National Chung Cheng University, Earth and Environmental Sciences, Chiayi County, Taiwan, (3)National Defense Medical Center, Graduate Institute Of Life Science, Taipei, Taiwan
The effects of the biogeochemical properties of clay minerals on the Pb sorption and desorption in various redox condition (194545)
Tae-hee Koo1, Jee-young Kim1,2 and Jinwook Kim3, (1)Yonsei University, Seoul, Korea, Republic of (South), (2)NIER National Institute of Environmental Research, Environmental Infrastructure Research Department, Environmental Measurement & Analysis Center, Incheon, Korea, Republic of (South), (3)Yonsei University, Seoul, South Korea
Influence on bacterial communities under the condition of organic manure substituting nitrogen fertilizer in a 36-year field experiment of Chinese Mollisols (123410)
Mingchao Ma1,2, Xin Jiang1,3 and Jun Li1,3, (1)Institute of Agricultural Resources and Regional Planning,Chinese Academy of Agriculture Sciences, Beijing, China, (2)Gembloux Agro-Bio Tech , University of Liège, Liège, Belgium, (3)Laboratory of Quality & Safety Risk Assessment for Microbial Products (Beijing), Ministry of Agriculture, Beijing, China

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