Comparative genomics of Phaeocystis species to reveal cold adaptations

Zoltán Füssy1,2, Igor V Grigoriev3, Kerrie Barry3, Jeremy Schmutz4, Richard D Hayes3, Adam Healey4, Corina P.D. Brussaard5, Marc Emil Frischer6, Kevin R Arrigo7 and Andrew Allen2,8, (1)Scripps Institution of Oceanography, La Jolla, CA, United States, (2)J. Craig Venter Institute La Jolla, La Jolla, CA, United States, (3)Joint Genome Institute, Walnut Creek, CA, United States, (4)HudsonAlpha Institute for Biotechnology, Huntsville, AL, United States, (5)NIOZ Royal Netherlands Institute for Sea Research, Department of Marine Microbiology and Biogeochemistry, Den Burg, Netherlands, (6)University of Georgia, Savannah, United States, (7)Stanford University, Earth System Science, Stanford, CA, United States, (8)Scripps Institution of Oceanography, La Jolla, United States
Abstract:
Phaeocystis are haptophyte algae dominating the world oceans in subpolar, temperate and tropical areas. Through the ability to form polysaccharide-embedded colonies in replete conditions, several species of Phaeocystis create massive blooms and thus participate as major players in the natural cycles of nutrients, notably carbon and sulfur. To underpin the ecological success of these microalgae, we created and annotated genomic data for 12 Phaeocystis sp. accessions. Using this data, we map the distribution of these species in world oceans and compare the “core” and “shell” gene repertoire of P. globosa pan-genome. Function-wise, our primary concern was to understand the nature of P. antarctica genetic capacity not contained in more temperate-water globosa species and to identify molecular processes involved in maintaining osmotic balance during exposure to freezing and low salinity during the Antarctic winter.