MM43A:
Linking 'Omics Insights to Marine Microbial Ecology and Biogeochemical Functioning II

Submit an Abstract to this Session

Session ID#: 11419

Session Description:
Throughout history oceanography has explored science at the interface of traditional disciplines. In recent years, cutting-edge 'omics techniques, trace nutrient chemistry methods, and big data management are setting the stage for the next wave of oceanographic insights that were not possible even a decade ago due to improvements in resolution, detection limit, and computational power. This session will explore the newest interdisciplinary insights into linking 'omics data with marine microbial ecology and biogeochemical functioning. Thus, we encourage submissions on field, lab, and modeling work cutting across chemistry, microbial physiology, ecology, biogeochemistry, biogeography, and responses to global change. Presentations will highlight studies that leverage, blend, or interpret 'omics data in novel, interdisciplinary ways to inform pressing questions in marine biogeochemistry.
Primary Chair:  Katherine R Mackey, University of California Irvine, Earth System Science, Irvine, CA, United States
Chairs:  Adam Martiny, University of California Irvine, Earth System Science, Irvine, CA, United States and Katherine R Mackey, University of California Irvine, Earth System Science, Irvine, CA, United States
Moderators:  Katherine R Mackey, University of California Irvine, Earth System Science, Irvine, CA, United States and Adam Martiny, University of California Irvine, Earth System Science, Irvine, CA, United States
Student Paper Review Liaison:  Katherine R Mackey, University of California Irvine, Earth System Science, Irvine, CA, United States
Index Terms:

4805 Biogeochemical cycles, processes, and modeling [OCEANOGRAPHY: BIOLOGICAL AND CHEMICAL]
4840 Microbiology and microbial ecology [OCEANOGRAPHY: BIOLOGICAL AND CHEMICAL]
4845 Nutrients and nutrient cycling [OCEANOGRAPHY: BIOLOGICAL AND CHEMICAL]
4855 Phytoplankton [OCEANOGRAPHY: BIOLOGICAL AND CHEMICAL]
Co-Sponsor(s):
  • B - Biogeochemistry and Nutrients
  • ME - Marine Ecosystems
  • PP - Phytoplankton and Primary Production

Abstracts Submitted to this Session:

MM43A-01
Multi-Omics Profiling of Phytoplankton Community Metabolism: Linking Meta-Transcriptomics and Metabolomics to Elucidate Phytoplankton Physiology in a Model Coastal System (92628)
Elizabeth B Kujawinski, Woods Hole Oceanographic Institution, Woods Hole, MA, United States, Krista Longnecker, Woods Hole Oceanographic Institution, Marine Chemistry & Geochemistry, Woods Hole, United States, Harriet Alexander, MIT-WHOI Joint Program, Woods Hole, MA, United States, Sonya Dyhrman, Columbia University, Lamont-Doherty Earth Observatory, Palisades, United States, Bethany D. Jenkins, University of Rhode Island, Cell and Molecular Biology, Kingston, RI, United States and Tatiana A Rynearson, University of Rhode Island, Graduate School of Oceanography, Narragansett, RI, United States
MM43A-02
The effect of temperature on carbon uptake and its fate in diverse strains of Prochlorococcus (93332)
Zackary I Johnson, Duke University, Duke University Marine Lab, Beaufort, United States
MM43A-03
A Prochlorococcus proving ground for constraint-based metabolic modeling and multi-‘omics data integration (90490)
John Casey1, Boyang Ji2, Saeed Shaoie2, Adil Mardinoglu2, Partho Sarathi Sen2, Oliver Jahn3, Khairi Reda4, Jason Leigh5, Michael J Follows3, Jens Nielsen2,6 and David M Karl7, (1)University of Hawaii at Manoa, Oceanography, Honolulu, HI, United States, (2)Chalmers University of Technology, Chemical and Biological Engineering, Gothenburg, Sweden, (3)Massachusetts Institute of Technology, Department of Earth, Atmospheric and Planetary Sciences, Cambridge, United States, (4)Argonne National Laboratory, Office of Science, Argonne, IL, United States, (5)University of Hawaii at Manoa, Information and Computer Sciences, Honolulu, HI, United States, (6)Technical University of Denmark, Novo Nordisk Foundation Center for Biosustainability, Horsholm, Denmark, (7)Daniel K. Inouye Center for Microbial Oceanography: Research and Education, University of Hawaii at Manoa, Honolulu, HI, United States
MM43A-04
Temporal and Spatial Variations in Transcriptional Patterns among Closely Related Marine Microbial Taxa (89807)
Irina N Shilova1, Julie Robidart2, Edward DeLong3 and Jonathan P Zehr1, (1)University of California Santa Cruz, Ocean Sciences, Santa Cruz, CA, United States, (2)National Oceanographic Centre, Southampton, United Kingdom, (3)University of Hawaiʻi at Mānoa, Department of Oceanography, School of Ocean and Earth Science and Technology, Honolulu, HI, United States
MM43A-05
Phosphite Utilization by the Globally Important Marine Diazotroph Trichodesmium (91214)
Despo Polyviou1, Andrew Hitchcock2, Alison J Baylay1, C Mark Moore3 and Thomas S Bibby1, (1)University of Southampton, Ocean and Earth Sciences, National Oceanography Centre, Southampton, United Kingdom, (2)The University of Sheffield, Department of Molecular Biology and Biotechnology, Sheffield, United Kingdom, (3)National Oceanography Centre, Southampton, United Kingdom
MM43A-06
Combining ‘OMIC tools and other targeted molecular methods to evaluate iron limitation of diatoms in the Northeast Pacific Ocean. (91880)
Phoebe Dreux Chappell1, Joselynn Wallace2, Bethany D. Jenkins2 and Kimberly Powell3, (1)University of South Florida, College of Marine Science, St. Petersberg, United States, (2)University of Rhode Island, Cell and Molecular Biology, Kingston, RI, United States, (3)Old Dominion University, Ocean, Earth, and Atmospheric Sciences, Norfolk, VA, United States
MM43A-07
Combining In Situ and Culture-based ‘Omic and Biogeochemical Measures to Identify the Physiological Ecology of a Blooming Diatom in the Amazon River Plume (92810)
Harriet Alexander, Woods Hole Oceanographic Institution, Biology, Woods Hole, MA, United States, Colleen A Durkin, Moss Landing Marine Laboratories, Moss Landing, CA, United States and Sonya Dyhrman, Columbia University, Lamont-Doherty Earth Observatory, Palisades, United States
MM43A-08
Strong latitudinal and vertical biogeography of Synechococcus diversity in the equatorial Pacific Ocean (89844)
Adam Martiny1, Alyssa G Kent2, Celine Mouginot2, Steven Baer3 and Michael W Lomas4, (1)University of California Irvine, Earth System Science, Irvine, CA, United States, (2)University of California, Irvine, Earth System Science, Irvine, CA, United States, (3)Bigelow Lab for Ocean Sciences, East Boothbay, ME, United States, (4)Bigelow Laboratory for Ocean Sciences, East Boothbay, United States
See more of: Microbiology and Molecular Biology